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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015818840.1_cds_XP_016499798.1_13684
CDS Infomation

[gene=LOC107818320] [db_xref=GeneID:107818320] [protein=2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial-like] [protein_id=XP_016499798.1] [location=join(52322..52549,54489..54623,54727..54909,55681..55838,55951..56050,56281..56392,56482..56621,56763..56948,57472..57639)] [gbkey=CDS]
Sequence

ATGGCTCTGTTCTTCTCAAAATCAAGAAAGTTGATCTATTTGAAACCCAAGATGGGATTT
TTGGGTTCACATTTTGTTCATCATCATCATACACTTATATCGCCAAATCTGAAACACCCA
TTACGAATTCTTGGATTCTATCCTCCCCACTTCGCCTTTCGCCGTTTTGAATCAACCAAA
GCTGAAATACAGCTGAATCACATGCAGAACATTGACAATAATTCCCAGGTCCTCAATTTC
CCTGGAGGCAAAGTGAAATTCACCTCACATTTGAACTTTATTCCTGAAACAAGAGAGGAG
AGAGTACACTGCTACAGGGTCCTTGACGACGATGGTTACCCCGTGACTAGCAATTTCGTA
CAGATCGACAAGGAAGTTGCATTAAAAATGTATACTGATATGATCACACTTCAAACAATG
GATACAATCTTTTACGAAGCACAAAGACAAGGAAGAATATCTTTCTATGTTACCACACTT
GGAGAAGAAGCTATCAATATTGCATCAGCTGCAGCACTTAGGATGGATGATTTCATCTTT
CCACAGTATAGGGAGCCTGGAGTTCTATTATGGAGAGGGTTTACTATTCAAGAATTTGCC
AATCAGTTGTTTGGAAATAAAGGCGATTATGGAAAAGGCAGGCAGATGCCTATCCATTAT
GGATCTAATAAGCACAATTATATTACAGTTGCATCAACAGTAGCTACTCAGCTTCCGCAT
GCTGTTGGTGCTGCCTATGCTCTGAAGATGGACGCGAAAGATGCATGTACAATTGTATAT
TTTGGAGATGGCGGCTCTAGCACGGGAGATTTTCATGCTGCTCTGAACTTTGCCGCGGTC
TTAGACGCACCTGTCATCTTTTTCTGCCGGAACAATGGTTTTGCAATAAGTACGCCTGTT
AGTGACCAGTTTCGAAGTGATGGTGTTGTTACCAGAGGAGAGGCCTATGGAATTCGTAGT
ATCCGTGTGGATGGTAACGATGCTCTTGCTGTTTTCACTGCTGTCCATGAGGCACGAAAG
ATGGCTATTAATGAACATAAACCTGTCCTCATTGAGGCCCTTACCTACAGAGCAGGACAT
CACTCAACCTCCGATGACTCCACCAAATATCGTCCAGCTAACGAAATCGAATGGTGGAGA
ACAGAAAGAGACCCTGTAACTAGATTCAGGAAATGGATTGAAAAAGAAGGGTGGTGGAGC
TCTCAGGCTGAGTCTGAACTTCGCACGAGTCTCAGGAAGCAGGTTTTGGAAGCCATTCAA
GTTGCAGAAAAAACAGAGAAGCCTCCAATTAAGGATGTATTTACAGATGTATATGATGTT
CCTCCAGCCAACCTACAAGAACAGGAAACATTCACTCGTGAAACAATCAGAAGACATCCG
CAGGATTATCCTACTGATGTTCCTATCTAG

Peptide Sequence

PEP ID

XP_016499798.1
PEP Infomation

PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial-like [Nicotiana tabacum]
Sequence

MALFFSKSRKLIYLKPKMGFLGSHFVHHHHTLISPNLKHPLRILGFYPPHFAFRRFESTK
AEIQLNHMQNIDNNSQVLNFPGGKVKFTSHLNFIPETREERVHCYRVLDDDGYPVTSNFV
QIDKEVALKMYTDMITLQTMDTIFYEAQRQGRISFYVTTLGEEAINIASAAALRMDDFIF
PQYREPGVLLWRGFTIQEFANQLFGNKGDYGKGRQMPIHYGSNKHNYITVASTVATQLPH
AVGAAYALKMDAKDACTIVYFGDGGSSTGDFHAALNFAAVLDAPVIFFCRNNGFAISTPV
SDQFRSDGVVTRGEAYGIRSIRVDGNDALAVFTAVHEARKMAINEHKPVLIEALTYRAGH
HSTSDDSTKYRPANEIEWWRTERDPVTRFRKWIEKEGWWSSQAESELRTSLRKQVLEAIQ
VAEKTEKPPIKDVFTDVYDVPPANLQEQETFTRETIRRHPQDYPTDVPI

Transcript Sequence

Gene sequence data has not been registered.